  function [data, auxData, metaData, txtData, weights] = mydata_Alestes_baremoze
%% set metadata
metaData.phylum     = 'Chordata'; 
metaData.class      = 'Actinopterygii'; 
metaData.order      = 'Characiformes'; 
metaData.family     = 'Alestidae';
metaData.species    = 'Alestes_baremoze'; 
metaData.species_en = 'Characin'; 

metaData.ecoCode.climate = {'Af', 'Am'};
metaData.ecoCode.ecozone = {'TPa'};
metaData.ecoCode.habitat = {'0iFr', '0iFl'};
metaData.ecoCode.embryo  = {'Fh'};
metaData.ecoCode.migrate = {};
metaData.ecoCode.food    = {'bjCi', 'jiCvf'};
metaData.ecoCode.gender  = {'D'};
metaData.ecoCode.reprod  = {'O'};

metaData.T_typical  = C2K(28); % K, body temp
metaData.data_0     = {'ab'; 'am'; 'Lp'; 'Li'; 'Wwb'; 'Wwp'; 'Wwi'; 'Ri'};  
metaData.data_1     = {'t-L'}; 

metaData.COMPLETE = 2.5; % using criteria of LikaKear2011

metaData.author    = {'Bas Kooijman'};    
metaData.date_subm = [2024 07 23];              
metaData.email     = {'bas.kooijman@vu.nl'};            
metaData.address   = {'VU University Amsterdam'};  

metaData.curator     = {'Dina Lika'};
metaData.email_cur   = {'lika@uoc.gr'}; 
metaData.date_acc    = [2024 07 23];

%% set data
% zero-variate data
data.ab =  4.5; units.ab = 'd';    label.ab = 'age at birth';    bibkey.ab = 'guess'; 
  temp.ab = C2K(28); units.temp.ab = 'K'; label.temp.ab = 'temperature';
data.am = 6*365;  units.am = 'd';    label.am = 'life span';              bibkey.am = 'fishbase';   
  temp.am = C2K(28); units.temp.am = 'K'; label.temp.am = 'temperature';

data.Lp = 20.9;   units.Lp = 'cm';   label.Lp = 'total length at puberty';bibkey.Lp = 'fishbase';
data.Li = 43;    units.Li = 'cm';   label.Li = 'ultimate total length';  bibkey.Li = 'fishbase';

data.Wwb = 2.7e-4;  units.Wwb = 'g';    label.Wwb = 'wet weight at birth';    bibkey.Wwb = 'fishbase';
  comment.Wwb = 'based on egg diameter of 0.8 mm: pi/6*0.08^3';
data.Wwp = 100;  units.Wwp = 'g';    label.Wwp = 'wet weight at puberty';    bibkey.Wwp = 'fishbase';
  comment.Wwp = 'based on 0.01096*Lp^3.00, see F1';
data.Wwi = 871.4;  units.Wwi = 'g';    label.Wwi = 'ultimate wet weight';    bibkey.Wwi = 'fishbase';
  comment.Wwi = 'based on 0.01096*Li^3.00, see F1';
  
data.Ri = 51000*871.4/220/365; units.Ri = '#/d'; label.Ri = 'max reprod rate'; bibkey.Ri = 'fishbase'; 
  temp.Ri = C2K(28); units.temp.Ri = 'K'; label.temp.Ri = 'temperature';
  comment.Ri = 'based on fecundity of 51000 at 220 g';
  
% uni-variate data
% time-length
data.tL = [ ... % time since birth (yr), total length (cm)
0.300	5.032
0.633	9.677
0.845	12.774
1.118	16.000
1.453	19.742
1.790	22.839
2.095	25.935
2.432	28.774
2.801	31.355
3.233	33.935
3.819	37.161
4.594	39.742
5.371	41.548];
data.tL(:,1) = 365 * data.tL(:,1); % convert yr to d
units.tL   = {'d', 'cm'};  label.tL = {'time', 'total length'};  bibkey.tL = 'MeroHech1988';
temp.tL    = C2K(28);  units.temp.tL = 'K'; label.temp.tL = 'temperature';
comment.tL = 'data for Lake Rudolf, digitized from drawn curve';

%% set weights for all real data
weights = setweights(data, []);
weights.tL = 10 * weights.tL;

%% set pseudodata and respective weights
[data, units, label, weights] = addpseudodata(data, units, label, weights);
weights.psd.k_J = 0; weights.psd.k = 0.1;

%% pack auxData and txtData for output
auxData.temp = temp;
txtData.units = units;
txtData.label = label;
txtData.bibkey = bibkey;
txtData.comment = comment;

%% Discussion points
D1 = 'males are supposed not to differ from females';
metaData.discussion = struct('D1', D1);

%% Facts
F1 = 'length-weight Ww in g = 0.01096*(TL in cm)^3.00';
metaData.bibkey.F1 = 'fishbase';
metaData.facts = struct('F1',F1);

%% Links
metaData.links.id_CoL = 'BP79'; % Cat of Life
metaData.links.id_ITIS = '640380'; % ITIS
metaData.links.id_EoL = '994688'; % Ency of Life
metaData.links.id_Wiki = 'Alestes_baremoze'; % Wikipedia
metaData.links.id_ADW = 'Alestes_baremoze'; % ADW
metaData.links.id_Taxo = '160366'; % Taxonomicon
metaData.links.id_WoRMS = '581694'; % WoRMS
metaData.links.id_fishbase = 'Alestes-baremoze'; % fishbase

%% References
bibkey = 'Wiki'; type = 'Misc'; bib = ...
'howpublished = {\url{http://en.wikipedia.org/wiki/wiki/Alestes_baremoze}}';  
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'Kooy2010'; type = 'Book'; bib = [ ...  % used in setting of chemical parameters and pseudodata
'author = {Kooijman, S.A.L.M.}, ' ...
'year = {2010}, ' ...
'title  = {Dynamic Energy Budget theory for metabolic organisation}, ' ...
'publisher = {Cambridge Univ. Press, Cambridge}, ' ...
'pages = {Table 4.2 (page 150), 8.1 (page 300)}, ' ...
'howpublished = {\url{../../../bib/Kooy2010.html}}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'MeroHech1988'; type = 'Misc'; bib = [ ... 
'title = {Growth of African freshwater fishes},'...
'author = {B. de Merona and T. Hecht and J. Moreau},'...
'year = {1988},'...
'howpublished = {\url{https://horizon.documentation.ird.fr/exl-doc/pleins_textes/pleins_textes_5/pt5/travaux_d/26396.pdf}}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'fishbase'; type = 'Misc'; bib = ...
'howpublished = {\url{https://fishbase.mnhn.fr/summary/Alestes-baremoze.html}}';  
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];

