function [data, auxData, metaData, txtData, weights] = mydata_Cochlearius_cochlearius
%% set metaData
metaData.phylum     = 'Chordata'; 
metaData.class      = 'Aves'; 
metaData.order      = 'Pelecaniformes'; 
metaData.family     = 'Ardeidae';
metaData.species    = 'Cochlearius_cochlearius'; 
metaData.species_en = 'Boat-billed heron'; 

metaData.ecoCode.climate = {'BWh','Cfa','Dfd'};
metaData.ecoCode.ecozone = {'TN'};
metaData.ecoCode.habitat = {'0iTg', '0iTs', 'xiFm'};
metaData.ecoCode.embryo  = {'Tncfm'};
metaData.ecoCode.migrate = {};
metaData.ecoCode.food    = {'biCva', 'biCi'};
metaData.ecoCode.gender  = {'Dg'};
metaData.ecoCode.reprod  = {'O'};

metaData.T_typical  = C2K(40.5); % K, body temp
metaData.data_0     = {'ab'; 'ax'; 'ap'; 'aR'; 'am'; 'Ww0'; 'Wwb'; 'Wwi'; 'Ri'}; 
metaData.data_1     = {'t-Ww'}; 

metaData.COMPLETE = 2.5; % using criteria of LikaKear2011

metaData.author   = {'Bas Kooijman'};    
metaData.date_subm = [2022 09 05];              
metaData.email    = {'bas.kooijman@vu.nl'};            
metaData.address  = {'VU University Amsterdam'};   

metaData.author_mod_1   = {'Bas Kooijman'};    
metaData.date_mod_1     = [2023 04 10];              
metaData.email_mod_1    = {'bas.kooijman@vu.nl'};            
metaData.address_mod_1  = {'VU University, Amsterdam'};   

metaData.author_mod_2   = {'Bas Kooijman', 'Starrlight Augustine'};    
metaData.date_mod_2     = [2023 07 02];              
metaData.email_mod_2    = {'bas.kooijman@vu.nl'};            
metaData.address_mod_2  = {'VU University, Amsterdam'};   

metaData.curator     = {'Starrlight Augustine'};
metaData.email_cur   = {'starrlight@tecnico.ulisboa.pt'}; 
metaData.date_acc    = [2023 07 02];

%% set data
% zero-variate data

data.ab = 30;    units.ab = 'd';    label.ab = 'age at birth';                 bibkey.ab = 'avibase';   
  temp.ab = C2K(36);  units.temp.ab = 'K'; label.temp.ab = 'temperature';
  comment.ab = '21-25 d';
data.tx = 40;    units.tx = 'd';    label.tx = 'time since birth at fledging'; bibkey.tx = 'JuarDick1972';   
  temp.tx = C2K(40.5);  units.temp.tx = 'K'; label.temp.tx = 'temperature';
data.tp = 120;    units.tp = 'd';    label.tp = 'time since birth at puberty'; bibkey.tp = 'guess';   
  temp.tp = C2K(40.5);  units.temp.tp = 'K'; label.temp.tp = 'temperature';
data.tR = 730;  units.tR = 'd';    label.tR = 'time since birth at 1st brood';  bibkey.tR = 'avibase';
  temp.tR = C2K(40.5);  units.temp.tR = 'K'; label.temp.tR = 'temperature';
data.am = 11.6*365; units.am = 'd';    label.am = 'life span';                  bibkey.am = 'AnAge';   
  temp.am = C2K(40.5);  units.temp.am = 'K'; label.temp.am = 'temperature'; 

data.Ww0 = 32.5;  units.Ww0 = 'g';  label.Ww0 = 'initial wet weight';         bibkey.Ww0 = 'avibase';
data.Wwb = 24.3;  units.Wwb = 'g';  label.Wwb = 'wet weight at birth';         bibkey.Wwb = 'JuarDick1972';
data.Wwi = 602; units.Wwi = 'g';  label.Wwi = 'ultimate wet weight for females';   bibkey.Wwi = 'avibase';
data.Wwim = 712; units.Wwim = 'g';  label.Wwim = 'ultimate wet weight for males';  bibkey.Wwim = 'avibase';

data.Ri  = 2.8/365; units.Ri  = '#/d'; label.Ri  = 'maximum reprod rate';  bibkey.Ri  = 'avibase';   
  temp.Ri = C2K(40.5);  units.temp.Ri = 'K'; label.temp.Ri = 'temperature';
  comment.Ri = '2.8 eggs per clutch, 1 clutch per yr';
 
% uni-variate data
% time-weight
data.tW_f = [ ... % time sincde birth (d) weight (g)
1.046	24.358
4.918	66.235
6.057	45.474
7.942	138.145
10.019	155.621
12.064	222.268
13.030	200.919
15.065	248.475
17.090	275.204
19.219	280.533
23.149	326.463
26.203	341.103];
units.tW_f   = {'d', 'g'};  label.tW_f = {'time since birth', 'wet weight', 'female'};  
temp.tW_f    = C2K(40.5);  units.temp.tW_f = 'K'; label.temp.tW_f = 'temperature';
bibkey.tW_f = 'JuarDick1972';
comment.tW_f = 'Data for female';
%
data.tW_m = [ ... % time sincde birth (d) weight (g)
0.932	26.087
3.005	33.728
3.778	85.838
5.667	70.906
8.030	84.349
9.894	134.209
10.874	141.208
13.022	185.299
15.068	255.417
21.058	280.061
24.296	320.166];
units.tW_m   = {'d', 'g'};  label.tW_m = {'time since birth', 'wet weight', 'male'};  
temp.tW_m    = C2K(40.5);  units.temp.tW_m = 'K'; label.temp.tW_m = 'temperature';
bibkey.tW_m = 'JuarDick1972';
comment.tW_m = 'Data for male';

%% set weights for all real data
weights = setweights(data, []);
weights.tW_f = 3 * weights.tW_f;
weights.tW_m = 3 * weights.tW_m;

%% set pseudodata and respective weights
[data, units, label, weights] = addpseudodata(data, units, label, weights);
weights.psd.k_J = 0; weights.psd.k = 1;

%% pack auxData and txtData for output
auxData.temp = temp;
txtData.units = units;
txtData.label = label;
txtData.bibkey = bibkey;
txtData.comment = comment;

%% Group plots
set1 = {'tW_f','tW_m'}; subtitle1 = {'Data for females, males'};
metaData.grp.sets = {set1};
metaData.grp.subtitle = {subtitle1};

%% Discussion points
D1 = 'body temperature is guessed';
D2 = 'males are assumed to differ from females by {p_Am} only';
D3 = 'mod_1: males have equal state variables at b, compared to females';
D4 = 'mod_1: Pseudo-data point k is used, rather than k_J; Data set tp and parameter t_R are added, the latter replacing clutch interval t_N. Postnatal T is based on PrinPres1991, see <a href="https://debtool.debtheory.org/lib/pet/html/get_T_Aves.html">get_T_Aves</a>. See further the <a href="https://debportal.debtheory.org/docs/Revision.html">revision page, theme puberty</a>';
metaData.discussion = struct('D1',D1, 'D2',D2, 'D3',D3, 'D4',D4);  

%% Links
metaData.links.id_CoL = 'WN29'; % Cat of Life
metaData.links.id_ITIS = '174873'; % ITIS
metaData.links.id_EoL = '45511512'; % Ency of Life
metaData.links.id_Wiki = 'Cochlearius_cochlearius'; % Wikipedia
metaData.links.id_ADW = 'Cochlearius_cochlearius'; % ADW
metaData.links.id_Taxo = '51771'; % Taxonomicon
metaData.links.id_WoRMS = '422582'; % WoRMS
metaData.links.id_avibase = '743689848534F1F7'; % avibase
metaData.links.id_birdlife = 'boat-billed-heron-cochlearius-cochlearius'; % birdlife
metaData.links.id_AnAge = ''; % AnAge

%% References
bibkey = 'Wiki'; type = 'Misc'; bib = ...
'howpublished = {\url{http://en.wikipedia.org/wiki/Cochlearius_cochlearius}}';
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'Kooy2010'; type = 'Book'; bib = [ ...  % used in setting of chemical parameters and pseudodata
'author = {Kooijman, S.A.L.M.}, ' ...
'year = {2010}, ' ...
'title  = {Dynamic Energy Budget theory for metabolic organisation}, ' ...
'publisher = {Cambridge Univ. Press, Cambridge}, ' ...
'pages = {Table 4.2 (page 150), 8.1 (page 300)}, ' ...
'howpublished = {\url{../../../bib/Kooy2010.html}}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'JuarDick1972'; type = 'Article'; bib = [ ... 
'author = {Carlos Juarez and Robert W. Dickerman}, ' ... 
'year = {1972}, ' ...
'title = {Nestling Development of Boat-Billed Herons (\emph{Cochlearius cochlearius}) at {S}an {B}las, {N}ayarit, {M}exico}, ' ...
'journal = {The Wilson Bulletin}, ' ...
'volume = {84(4)}, ' ...
'pages = {456-468}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'avibase'; type = 'Misc'; bib = ...
'howpublished = {\url{https://avibase.bsc-eoc.org/species.jsp?lang=EN&avibaseid=743689848534F1F7&sec=lifehistory}}';
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'PrinPres1991'; type = 'Article'; bib = [ ... 
'doi = {10.1016/0300-9629(91)90122-S}, ' ...
'author = {R. Prinzinger and A.Pre{\ss}mar and E. Schleucher}, ' ... 
'year = {1991}, ' ...
'title = {Body temperature in birds}, ' ...
'journal = {Comp. Biochem. Physiol.}, ' ...
'volume = {99A(4)}, ' ...
'pages = {499-506}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];

