function [data, auxData, metaData, txtData, weights] = mydata_Progne_chalybea
%% set metaData
metaData.phylum     = 'Chordata'; 
metaData.class      = 'Aves'; 
metaData.order      = 'Passeriformes'; 
metaData.family     = 'Hirundinidae';
metaData.species    = 'Progne_chalybea'; 
metaData.species_en = 'Grey-breasted martin'; 

metaData.ecoCode.climate = {'A','Cwa','Cfa'};
metaData.ecoCode.ecozone = {'TN'};
metaData.ecoCode.habitat = {'0iTh', '0iTf'};
metaData.ecoCode.embryo  = {'Tnwf'};
metaData.ecoCode.migrate = {};
metaData.ecoCode.food    = {'biCi'};
metaData.ecoCode.gender  = {'Dg'};
metaData.ecoCode.reprod  = {'O'};

metaData.T_typical  = C2K(41.6); % K, body temp
metaData.data_0     = {'ab'; 'ax'; 'ap'; 'aR'; 'am'; 'Ww0'; 'Wwb'; 'Wwi'; 'Ri'}; 
metaData.data_1     = {'t-Ww'}; 

metaData.COMPLETE = 2.5; % using criteria of LikaKear2011

metaData.author      = {'Bas Kooijman'};    
metaData.date_subm   = [2022 10 10];              
metaData.email       = {'bas.kooijman@vu.nl'};            
metaData.address     = {'VU University Amsterdam'};  

metaData.author_mod_1   = {'Bas Kooijman', 'Starrlight Augustine'};    
metaData.date_mod_1     = [2023 07 08];              
metaData.email_mod_1    = {'bas.kooijman@vu.nl'};            
metaData.address_mod_1  = {'VU University, Amsterdam'};   

metaData.curator     = {'Starrlight Augustine'};
metaData.email_cur   = {'starrlight@tecnico.ulisboa.pt'}; 
metaData.date_acc    = [2023 07 08];

%% set data
% zero-variate data

data.ab = 15.5;    units.ab = 'd';    label.ab = 'age at birth';           bibkey.ab = 'avibase';   
  temp.ab = C2K(36);  units.temp.ab = 'K'; label.temp.ab = 'temperature';
  comment.ab = 'Wiki: 15-16 d';
data.tx = 22;    units.tx = 'd';    label.tx = 'time since birth at fledging'; bibkey.tx = 'avibase';   
  temp.tx = C2K(41.6);  units.temp.tx = 'K'; label.temp.tx = 'temperature';
data.tp = 66;    units.tp = 'd';    label.tp = 'time since birth at puberty'; bibkey.tp = 'guess';   
  temp.tp = C2K(41.6);  units.temp.tp = 'K'; label.temp.tp = 'temperature';
data.tR = 365;    units.tR = 'd';    label.tR = 'time since birth at 1st brood'; bibkey.tR = 'guess';
  temp.tR = C2K(41.6);  units.temp.tR = 'K'; label.temp.tR = 'temperature';
data.am = 13.9*365;    units.am = 'd';    label.am = 'life span';               bibkey.am = 'guess';   
  temp.am = C2K(41.6);  units.temp.am = 'K'; label.temp.am = 'temperature'; 

data.Ww0 = 3.18;  units.Ww0 = 'g';  label.Ww0 = 'initial wet weight';         bibkey.Ww0 = 'avibase';
data.Wwb = 2.8;   units.Wwb = 'g';   label.Wwb = 'wet weight at birth';     bibkey.Wwb = 'Turn1984';
data.Wwi = 42;   units.Wwi = 'g';   label.Wwi = 'ultimate wet weight';     bibkey.Wwi = 'avibase';

data.Ri  = 3.2/365;   units.Ri  = '#/d'; label.Ri  = 'maximum reprod rate'; bibkey.Ri  = 'avibase';   
  temp.Ri = C2K(41.6);  units.temp.Ri = 'K'; label.temp.Ri = 'temperature';
  comment.Ri = '3.2 eggs per clutch, 1 clutch per yr';
 
% uni-variate data
% time-weight
data.tW = [ ...
 1	 2.804
 2	 4.815
 3	 6.825
 4	 9.048
 5	11.693
 6	14.762
 7	17.619
 8	21.746
 9	25.344
10	29.471
11	31.164
12	33.492
13	35.820
14	37.513
15	38.889
16	40.265
17	40.053
18	39.418
19	40.053
20	39.101
21	39.630
22	39.630
23	39.206
24	38.360
25	36.984
26	37.090
27	36.667
28	36.455];
data.tW(:,1) = data.tW(:,1) - 1; % set origin at hatch
units.tW  = {'d', 'g'};  label.tW = {'time since birth', 'wet weight'};  
temp.tW   = C2K(41.6);  units.temp.tW = 'K'; label.temp.tW = 'temperature';
bibkey.tW = 'Turn1984';

%% set weights for all real data
weights = setweights(data, []);
weights.tW = weights.tW * 2;

%% set pseudodata and respective weights
[data, units, label, weights] = addpseudodata(data, units, label, weights);
weights.psd.k_J = 0; weights.psd.k = 1;

%% pack auxData and txtData for output
auxData.temp = temp;
txtData.units = units;
txtData.label = label;
txtData.bibkey = bibkey;
txtData.comment = comment;

%% Discussion points
D1 = 'Males are assumed to differ from females by {p_Am} only'; 
D2 = 'Body temperature is guessed, food density varies';
D3 = 'mod_1: Pseudo-data point k is used, rather than k_J; Data set tp and parameter t_R are added, the latter replacing clutch interval t_N. Postnatal T is based on PrinPres1991, see <a href="https://debtool.debtheory.org/lib/pet/html/get_T_Aves.html">get_T_Aves</a>. See further the <a href="https://debportal.debtheory.org/docs/Revision.html">revision page, theme puberty</a>';
metaData.discussion = struct('D1',D1, 'D2',D2, 'D3',D3);

%% Links
metaData.links.id_CoL = '6W9Z5'; % Cat of Life
metaData.links.id_ITIS = '178468'; % ITIS
metaData.links.id_EoL = '45511460'; % Ency of Life
metaData.links.id_Wiki = 'Progne_chalybea'; % Wikipedia
metaData.links.id_ADW = 'Progne_chalybea'; % ADW
metaData.links.id_Taxo = '56412'; % Taxonomicon
metaData.links.id_WoRMS = ''; % WoRMS
metaData.links.id_avibase = 'ECA64B1892C99539'; % avibase
metaData.links.id_birdlife = 'grey-breasted-martin-progne-chalybea'; % birdlife
metaData.links.id_AnAge = ''; % AnAge

%% References
bibkey = 'Wiki'; type = 'Misc'; bib = ...
'howpublished = {\url{http://en.wikipedia.org/wiki/Progne_tapera}}';
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'Kooy2010'; type = 'Book'; bib = [ ...  % used in setting of chemical parameters and pseudodata
'author = {Kooijman, S.A.L.M.}, ' ...
'year = {2010}, ' ...
'title  = {Dynamic Energy Budget theory for metabolic organisation}, ' ...
'publisher = {Cambridge Univ. Press, Cambridge}, ' ...
'pages = {Table 4.2 (page 150), 8.1 (page 300)}, ' ...
'howpublished = {\url{../../../bib/Kooy2010.html}}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'Turn1984'; type = 'article'; bib = [ ... 
'doi = {10.2307/1367339}, ' ...
'author = {Turner, A. K.}, ' ... 
'year = {1984}, ' ...
'title = {Nesting and Feeding Habits of Brown-Chested Martins in Relation to Weather Conditions}, ' ...
'series = {The Condor}, ' ...
'volume = {86(1)}, ' ...
'pages = {30-35}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'avibase'; type = 'Misc'; bib = ...
'howpublished = {\url{https://avibase.bsc-eoc.org/species.jsp?lang=EN&avibaseid=ECA64B1892C99539&sec=lifehistory}}';
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'PrinPres1991'; type = 'Article'; bib = [ ... 
'doi = {10.1016/0300-9629(91)90122-S}, ' ...
'author = {R. Prinzinger and A.Pre{\ss}mar and E. Schleucher}, ' ... 
'year = {1991}, ' ...
'title = {Body temperature in birds}, ' ...
'journal = {Comp. Biochem. Physiol.}, ' ...
'volume = {99A(4)}, ' ...
'pages = {499-506}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];

